Sample Customer Publications

• Schermerhorn, K.M., Tanner, N., Kelman, Z., Gardner, A. "High-temperature single-molecule kinetic analysis of thermophilic archaeal MCM helicases", Nucleic acids research, 2016, DOI: 10.1093/nar/gkw612.
• Deng, Y., Turk, B.E. "analysis of protein tyrosine kinase specificity using positional screeening peptide microarrays", peptide microarrays, 2016, Vol 1352, 27-34.

• Wu, R.A., Dagdas, Y.S., Yilmaz, S.T., Yildiz, A., Collins, K. "Single-molecule imaging of telomerase reverse transcriptase in human telomerase holoenzyme and minimal RNP complexes", eLife, 2015, e08363.
• Arnett, D.C., Persechini, A., Tran, Q.K., Black, D. J., Johnson, C.K. "Fluorescence quenching studies of structure and dynamics in calmodlin-eNOS complexes", FEBS letters, 2015, Vol 589, 11, 1173-1178.

• Lan, M., Goryaynov, A., Lindquist, A., Rexach, M., Yang, W.D. "Quantifying nucleolorin stoichiometry inside single nuclear pore complexes in vivo", Scientific report 5, 2015, article number: 9372.
• Kavusi, S., Chen, Y.W., Chen, M., Lang, C. "Device and method for indirect modulation of detection environment", US patent: US9188585 B2, Nov. 17, 2015.

• Sauter, A., Duffle, Y. M., Boehm, H., Martinez, A., Spatz, J. P. and Appel, S."Surface-mediated priming during in vitro generation of monocyte-derived dendritic cells", Scandinavian J. of Immunology, 2015, 81, 56-65.

• Piliarik, M. & Sandoghdar, V. "Direct optical sensing of single unlabelled proteins and super-resolution imaging of their binding sites", Nature Communications, 2014, 5, 4495.

• Deng, Y., Alicea-Velazques, N. L., Bannwarth, L., Lehtones, S. I., Boggon, T. J., Cheng, H-C., Hytonen, V. P., and Turk, B. E. "Global analysis of human nonreceptor tyrosine kinase specificity using high-density peptide microarrays", J. Proteome Res., 2014, 13, 4339-4346.

• Josse, R., Martin, S.E., Guha, R., Ormanoglu, P., Pfister, T. D., Reaper, P. M., Barnes, C. S., Jones, J., Charlton, P., Pollard, J. R., Morris, J., Doroshow, J. H., and Pommier, Y."ATR inhibitos VE-821 and VX-970 sensitize cancer cells to topoisomerase I inhibitors by disabling DNA replication inhibition and fork elongation responses", Cancer Research, 2014, 74, 6968

• Tisher, A., Madde, P., Tasson, L. M., Auton, M."Misfolding of vWF to pathologically disordered conformations impacts the severity of von Willebrand disease", Biophysical J., 2014, 107, 1185-1195. 

• Tisher, A., Madde, P., Blancas-Mejis, L. M., and Auton, M. "A molten globule intermediate of the Von Willebrand factor A1 dmain firmly tethers platelets under shear flow", Proteins, 2014, 82, 867-878.

• Wronska, D. B., Krajewska, M., Lyina, N., Morrison, J. C., Juzumjene, D., Culp, D., Nair, S., Darby, M., and Hofmann, C. M."Peptide-conjugated glass slides for selective capture and purification of diagnostic cells: Applications in urine cytology", BioTechniques, 2014, 57, 63-71

• Ramji, R., Chiong, C. F., Hirsta, Hiroaki, H., Rahman, A.R. A., and Lim, C. T."Rapid quantification of live cell receptors using bioluminescence in a flow-based microfluidic device", small, 2014,DOI: 10, 1002.

 • McCann, C. P., Rericha, E. C., Wang, C., Losert, W., Parent, C. A."Dictyostelium cells migrate simialry on surfaces of varying chemical composition", PloS One, 2014, 9, e87981.

• Saremi, B., Wei, M-Y, Liu, Y., Cheng, B-B., Yuan, B-H. "Re-evaluation of biotin-streptavidin conjugation in Forster resonance energy transfer applications", J. Biomed. Opt., 2014, 19(8), 085008.

• Wang, C., Chowhury, S., Driscoll, M., Parent, C. A., Gupta, S. K., and Losert, W."The interplay of cell-cell and cell-substrate adhesion in collective cell migration", J. R. S. Interface 6, 2014, 11, 100.

• Bahrami F., Maisonneuve, M., Meunier, M., Aitchison, J. S., and Mojahedi, M. "Self-referenced spectroscopy using plasmon waveguide resonance biosensor", Biomedical Optics Express, 2014, 5, 2481-2487.

• Jovanovic-Talisman, T., Chait, B. T., and Rout, M. T."NPC mimics: Probing the mechanism of nucleocytoplasmic transport", Methods Cell Biol., 2014, 122, 379-393.

• Tischer, A., Cruz, M. A., Auton, M. “The linker between the D3 and A1 domains of vWF suppresses A1-GPlb catch bonds by site-specific binding to the A1 domain”, Protein Sci. 2013, 22, 1049-1059.

• Wang, C. L., Chowdhury, S., Gupta, S. K., Losert, W. “Optical micromanipulation of active cells with minimal perturbations: direct and indirect pushing”, J. Biomedical Optics, 2013, 18, 045001-1-7.

• Singhal, G., Leo, E., Setty, S. K. G., Pommier, Y., Thimmapaya, B. “Adenovirus E1A oncogene induces re-replication of cellular DNA and alters DNA replication dynamics”, J. Virol. 2013, 10, 00879-13.

• Rudney, C. R., Lane, R. S. K., Fielding, A. J., Magennis, S. W., Hay, S., Scrutton, N. S. “Enzymatic single-molecule kinetic isotope effects”, J. Am. Chem. Soc. 2013, 135, 3855-3864.

• Klapper, Y., Vranceanu, M., Ishitsuka, Y., Evans, D., Scheider, D., Nienhaus, G. U., Leneweit, G. “Surface energy of phospholipid bilayers and the correction to their hydration”, J. Colloid Interf. Sci. 2013, 390, 267-274.

• Lee, K. Y., Fu, H. Q., Aladjem, M. I., Myung, K. “ATAD5 regulates the lifespan of DNA replication factories by modulating PCNA level on the chromatin”, J. Chem. Biol. 2013, 200, 31-44.

• Alley, W. R., Mann, B. F., Hruska, V., Novotny, M. V. “Isolation and purification of glycoconjugates from complex biological sources by recycling high-performance liquid chromatography”, Anal. Chem. 2013, 85, 10408-10416.

• Shen, L., Adachi, T., Venden Bout, D. A., Zhu, X.-Y. “A mobile precursor determines amyloid-β peptide fibril formation at the liquid-solid interface,” J. Am. Chem. Soc. 2012, 134, 14172–14178.

• Lauridsen, L. H., Shamaileh, H. A., Edwards, S. L., Taran, E., Veedu, R. N. “Rapid one-step selection method for generating nucleic acid aptamers: Development of a DNA Aptamer against a-bungarotoxin”, PloS One, 2012, 7, 1-6.

• Chung, H. S., Cellmer, T., Louis, J. M., Eaton, W. A. “Measuring ultrafast protein folding rates from photon-by-photon analysis of single molecule fluorescence trajectories”, Chem. Phys. 2012, 422, 229-237.

• Powell, L. R., Dukes, K. D., Lammi, R. K. “Probing the efficacy of peptide-based inhibitors against acid-and zinc-promoted oligomerization of amyloid--peptide via single-oligomer spectroscopy”, Biophysical Chem. 2012, 160, 12-19.

• Li, Y. M., Xiao, H. J., Renty, C. D., Jaramillo-Lambert, A., Han, Z. Y., Depamphilis, M., Brown, K., Zhu, W. “The involvement of acidic nucleoplasmic DNA-binding proten (And-1_ in the regulation of prereplicative complex (pre-RC) assembly in human cells”, JBC, 2012, 287, 42469-42479.

• Sbrana, F., Fotia, C., Bracalello, A., Baldini, N., Marletta, G., Ciapetti, G., Bochicchia, B., Vassalli, M. “Multiscale characterization of a chimeric biomimetic polypeptide for stem cell culture”, Bioinspiration & Biomimetics, 2012, 7, 1-10.

• Tweedy, C. W., Lafferty, W. M., Vander, H. P. B. “Systems and methods for adaptive recursive sequencing”, US patent (WO2011106556A2), 2011.

• Telley, I. A., Bieling, P., Surrey, T. “Reconstitution and quantification of dynamic microtubule and tracking in vitro using TIRF microscopy”, Methods in Microbiology, 2011, 777, 127-145.

• Biyani, M., Memoto, N., Ichiki, T. “DNA-linked protein arrays for high-throughtput proteomics: from spatially unknown DNA arrays to identifiable protein arrays”, NanoLife, 2010, 1, 33-43. • Menachery, A., Graham, D., Messerli, S. M., Pethig, R., Smith, P. L. S. “Dielectrophoretic tweezer for isolating and manipulating target cells”, IET Nanotechnology, 2011, 5, 1-7.

• Conti, C., Leo, E., Eichler, G. S., Sordet, O., Martin, M. M., Fan, A., Aladjem, M. I., and Pommier, Y. “Inhibition of Histone Deacetylase in Cancer Cells Slows Down Replication Forks, Activates Dormant Origins, and Induces DNA Damage”, Cancer Research, 2010, 70, 4470.

• Zhu, X.-Y., Holtz, B., Wang, Y., Wang, L.-X., Orndorff, P. E., Guo, A. “Quantitative glycomics from fluidic glycan microarrays,” J. Am. Chem. Soc. 2009, 131, 13646-13650. • Martin, E., Piehl, A. R. “Control circuit for overcoming stiction”, USPTO (US7,834,829 B2), 2010.

• Chung, H. S., Louis, J. M., Eaton, W. A. “Experimental determination of upper bound for transition path times in protein folding from single-molecule photon-by-photon trajectories”, PNAS 2009, 106. 11837-11844.

• Kwon, K., Grose, C., Pieper, R., Pandya, G. A., Fleischmann, R. D., Peterson, S. N. “High quality protein microarray using in situ protein purification”, BMC Biotechnology, 2009, 9, 1-10. • Tan, C. P., Seo, B. R., Brooks, D. J., Chandler, E. M., Craighead, H. G., Fischbach, C. “Parylene peel-off arrays to probe the role of cell-cell interactions in tumour angiogenesis”, Integrative Biol. 2009, 1, 587-594.

• Deng, Y., Wang, Y., Holtz, B., Li, J.-Y., Traaseth, N., Veglia, G., Stottrup, B., Pei, D., Elde, R., Guo, A. Zhu, X.-Y. “Fluidic and air-stable supported lipid bilayer and cell-mimicking microarrays,” J. Am. Chem. Soc. 2008, 130, 6267-6271.

• Roy, R., Hohng, S. C., Ha, T. K. “A practical guide to single-molecule FRET”, Nature Methods, 2008, 5, 507-515.

• Dukes, K. D., Rodenberg, C. F., Lammi, R. K. “Monitoring the earliest amyloid--oligomers via quantized photobleaching of dye-labeled peptides”, Anal. Chem. 2008, 382, 29-34.

• Holtz, B., Wang, Y., Zhu, X.-Y., Guo, A. “Denaturing and refolding of protein molecules on surfaces,” Proteomics 2007, 7, 1771-1774.

• A. Guo, X.-Y. Zhu “Chapter 4: The critical role of surface chemistry in protein microarrays,” in Functional Protein Microarrays in Drug Discovery, edt. Paul Predki, page 53-71 (CRC press, Boca Raton, 2007).

• Robotti, K. “Sensors comprising a chelated metal ion linker layer”, US patentUS#20090084166A1, 2007. • Shiu, J. Y., Chen, P. L. “Addressable protein patterning via switchable superhydrophobic microarrays”, Adv. Funct. Mater. 2007, 17, 2680-2686.

• Deng, Y., Zhu, X.-Y., T. Kienlen, A. Guo “Transport at the air/water interface is the reason for rings in protein microarrays,” J. Am. Chem. Soc. 2006, 128, 2768-2769.

• Duckworth, B. P., Xu, J. H., Taton, T. A., Guo, A., Distefano, M. “Site-specific, covalent attachment of proteins to a solid surface”, Bioconjugate Chem. 2006, 17, 967-974.

• Cha, T.-W., Guo, A., Zhu X.-Y. “Enzymatic activity on a chip: the critical role of protein orientation,” Proteomics, 2005, 5, 416-419.

• Seong, S.Y. “Academic and commercial aspects of protein microarray development”, Chapter 8 of protein microarrays, edited by Mark Schena, 2005, P137-158.